annotate variant_effect_predictor/Bio/EnsEMBL/Variation/RegulationVariation.pm @ 2:a5976b2dce6f

changing defualt values for ensembl database
author mahtabm
date Thu, 11 Apr 2013 17:15:42 +1000
parents 1f6dce3d34e0
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1 =head1 LICENSE
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2
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3 Copyright (c) 1999-2012 The European Bioinformatics Institute and
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4 Genome Research Limited. All rights reserved.
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6 This software is distributed under a modified Apache license.
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7 For license details, please see
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8
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9 http://www.ensembl.org/info/about/code_licence.html
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10
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11 =head1 CONTACT
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12
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13 Please email comments or questions to the public Ensembl
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14 developers list at <dev@ensembl.org>.
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16 Questions may also be sent to the Ensembl help desk at
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17 <helpdesk@ensembl.org>.
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18
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19 =cut
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20
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21 package Bio::EnsEMBL::Variation::RegulationVariation;
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22
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23 use strict;
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24 use warnings;
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25
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26 use base qw(Bio::EnsEMBL::Variation::VariationFeatureOverlap);
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27
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28 sub feature_label {
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29 my ($self, $feature_label) = @_;
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30 $self->{feature_label} = $feature_label if $feature_label;
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31 return $self->{feature_label};
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32 }
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33
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34 sub target_feature {
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35 # XXX: fetch the target feature
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36 }
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38 sub target_feature_stable_id {
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39 my ($self, $target_feature_stable_id) = @_;
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40 $self->{target_feature_stable_id} = $target_feature_stable_id if $target_feature_stable_id;
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41 return $self->{target_feature_stable_id};
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42 }
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44 1;