Mercurial > repos > lparsons > rseqc_dev3
comparison inner_distance.xml @ 1:5eef4ef0ab25 draft
Update R dependency version
| author | lparsons |
|---|---|
| date | Mon, 07 Oct 2013 14:41:52 -0400 |
| parents | f85fac5a4dce |
| children |
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| 0:f85fac5a4dce | 1:5eef4ef0ab25 |
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| 1 <tool id="rseqc_inner_distance" name="Inner Distance" version="1.1"> | 1 <tool id="rseqc_inner_distance" name="Inner Distance" version="1.1"> |
| 2 <description>calculate the inner distance (or insert size) between two paired RNA reads</description> | 2 <description>calculate the inner distance (or insert size) between two paired RNA reads</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="2.11.0">R</requirement> | 4 <requirement type="package" version="3.0.1">R</requirement> |
| 5 <requirement type="package" version="1.7.1">numpy</requirement> | 5 <requirement type="package" version="1.7.1">numpy</requirement> |
| 6 <requirement type="package" version="2.3.7">rseqc</requirement> | 6 <requirement type="package" version="2.3.7">rseqc</requirement> |
| 7 </requirements> | 7 </requirements> |
| 8 <command> | 8 <command> |
| 9 inner_distance.py -i $input -o output -r $refgene | 9 inner_distance.py -i $input -o output -r $refgene |