Mercurial > repos > lparsons > rseqc

view test-data/output.clipping_profile.r @ 1:cd2daa987b69 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc commit 2400cce6e3918648fda8f2a8d8485ab251a58827
author lparsons
date Tue, 07 Jul 2015 14:14:04 -0400
parents 306127635959
children
line wrap: on
line source

pdf("output.clipping_profile.pdf")
read_pos=c(0,1,2,3,4,5,6,7,8,9,44,45,46,47,48,49,50)
count=c(16,12,11,8,6,5,1,1,1,1,1,2,2,2,3,4,4)
plot(read_pos,1-(count/40),col="blue",main="clipping profile",xlab="Position of reads",ylab="Mappability",type="b")
dev.off()