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view test-data/bamstats.txt @ 1:cd2daa987b69 draft default tip

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planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc commit 2400cce6e3918648fda8f2a8d8485ab251a58827
author lparsons
date Tue, 07 Jul 2015 14:14:04 -0400
parents 306127635959
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Load BAM file ...  Done

#==================================================
#All numbers are READ count
#==================================================

Total records:                          40

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        0
Unmapped reads:                         0
mapq < mapq_cut (non-unique):           0

mapq >= mapq_cut (unique):              40
Read-1:                                 20
Read-2:                                 20
Reads map to '+':                       20
Reads map to '-':                       20
Non-splice reads:                       36
Splice reads:                           4
Reads mapped in proper pairs:           39
Proper-paired reads map to different chrom:0