comparison tool_dependencies.xml @ 0:0525e5c2a962 draft default tip

planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7

0:0525e5c2a962

<?xml version="1.0"?>
<tool_dependency>
    <package name="ea-utils" version="1.1.2-484">
        <install version="1.0">
            <actions>
                <action type="download_by_url">http://ea-utils.googlecode.com/files/ea-utils.1.1.2-484.tar.gz</action>
                <!-- Unable to get varcall to compile properly we don't need it, so skip -->
                <action type="shell_command">sed -i.bak 's/varcall$//' Makefile</action>
                <action type="shell_command">PREFIX=$INSTALL_DIR make install</action>
                <!-- For some reason, this is not installed by the Makefile, so move it ourselves -->
                <action type="move_file">
                    <source>sam-stats</source>
                    <destination>$INSTALL_DIR/bin</destination>
                </action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        </readme>
    </package>
</tool_dependency>