Mercurial > repos > lparsons > package_ea_utils_1_1_2_484

annotate tool_dependencies.xml @ 0:0525e5c2a962 draft default tip

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planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
author lparsons
date Mon, 13 Jul 2015 11:21:02 -0400
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0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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1 <?xml version="1.0"?>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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2 <tool_dependency>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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3 <package name="ea-utils" version="1.1.2-484">
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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4 <install version="1.0">
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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5 <actions>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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6 <action type="download_by_url">http://ea-utils.googlecode.com/files/ea-utils.1.1.2-484.tar.gz</action>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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7 <!-- Unable to get varcall to compile properly we don't need it, so skip -->
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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8 <action type="shell_command">sed -i.bak 's/varcall$//' Makefile</action>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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9 <action type="shell_command">PREFIX=$INSTALL_DIR make install</action>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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10 <!-- For some reason, this is not installed by the Makefile, so move it ourselves -->
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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11 <action type="move_file">
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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12 <source>sam-stats</source>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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13 <destination>$INSTALL_DIR/bin</destination>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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14 </action>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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15 <action type="set_environment">
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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16 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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17 </action>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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18 </actions>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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19 </install>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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20 <readme>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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21 </readme>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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22 </package>
0525e5c2a962 planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_484 commit ff703cab6972f1486f9800786b63163ed8ab09f7
lparsons
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23 </tool_dependency>