|
1
|
1 PACKAGE INFO
|
|
|
2 parallel 3.1.1
|
|
|
3 BiocGenerics 0.12.1
|
|
|
4 Biobase 2.26.0
|
|
|
5 Rcpp 0.11.5
|
|
|
6 mzR 2.0.0
|
|
|
7 igraph 0.7.1
|
|
|
8 xcms 1.42.0
|
|
|
9 snow 0.3.13
|
|
|
10 batch 1.1.4
|
|
|
11
|
|
|
12
|
|
|
13 ARGUMENTS INFO
|
|
|
14 zipfile /w/galaxy/galaxy4metabolomics/galaxy-dist/database/files/041/dataset_41794.dat
|
|
|
15 xfunction xcmsSet
|
|
|
16 nSlaves 8
|
|
|
17 method matchedFilter
|
|
|
18 step 0.01
|
|
|
19 fwhm 4
|
|
|
20 max 50
|
|
|
21 snthresh 1
|
|
|
22 steps 2
|
|
|
23
|
|
|
24
|
|
|
25 INFILE PROCESSING INFO
|
|
|
26
|
|
|
27
|
|
|
28 MAIN PROCESSING INFO
|
|
|
29 Starting snow cluster with 8 local sockets.
|
|
|
30 Detecting features in file # 1 : HU_neg_028.mzXML
|
|
|
31 Detecting features in file # 2 : HU_neg_060.mzXML
|
|
|
32 Detecting features in file # 3 : HU_neg_051.mzXML
|
|
|
33 Detecting features in file # 4 : HU_neg_017.mzXML
|
|
|
34 Detecting features in file # 5 : HU_neg_034.mzXML
|
|
|
35 Detecting features in file # 6 : Blanc09.mzXML
|
|
|
36 Detecting features in file # 7 : Blanc06.mzXML
|
|
|
37 Detecting features in file # 8 : Blanc12.mzXML
|
|
|
38 Detecting features in file # 9 : Blanc04.mzXML
|
|
|
39
|
|
|
40
|
|
|
41 XSET OBJECT INFO
|
|
|
42 An "xcmsSet" object with 9 samples
|
|
|
43
|
|
|
44 Time range: 0.7-1140 seconds (0-19 minutes)
|
|
|
45 Mass range: 50.0019-999.9863 m/z
|
|
|
46 Peaks: 135846 (about 15094 per sample)
|
|
|
47 Peak Groups: 0
|
|
|
48 Sample classes: bio, blank
|
|
|
49
|
|
|
50 Profile settings: method = bin
|
|
|
51 step = 0.01
|
|
|
52
|
|
|
53 Memory usage: 13.8 MB
|
|
|
54
|
|
|
55
|
|
|
56 DONE
|
