Mercurial > repos > lecorguille > xcms_summary

comparison abims_xcms_summary.xml @ 45:43122259be1f draft

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planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit eca29d4347fe2f4802091c4a06715232a6fd9253
author workflow4metabolomics
date Mon, 15 Jul 2024 15:56:21 +0000
parents 9df658383852
children 18d050f7b9d4
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44:9df658383852 45:43122259be1f
1 <tool id="abims_xcms_summary" name="xcms process history" version="@TOOL_VERSION@+galaxy0"> 1 <tool id="abims_xcms_summary" name="xcms process history" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
2 2
3 <description>Create a summary of XCMS analysis</description> 3 <description>Create a summary of XCMS analysis</description>
4 4
5 <macros> 5 <macros>
6 <import>macros.xml</import> 6 <import>macros.xml</import>
39 <param name="image" value="faahKO.xset.group.retcor.group.fillpeaks.RData" ftype="rdata"/> 39 <param name="image" value="faahKO.xset.group.retcor.group.fillpeaks.RData" ftype="rdata"/>
40 <output name="htmlOutput" file="faahKO.xset.group.retcor.group.fillpeaks.summary.html" /> 40 <output name="htmlOutput" file="faahKO.xset.group.retcor.group.fillpeaks.summary.html" />
41 </test>--> 41 </test>-->
42 <test> 42 <test>
43 <param name="image" value="faahKO-single.xset.merged.group.retcor.group.fillpeaks.RData" ftype="rdata"/> 43 <param name="image" value="faahKO-single.xset.merged.group.retcor.group.fillpeaks.RData" ftype="rdata"/>
44 <output name="htmlOutput" file="faahKO-single.xset.merged.group.retcor.group.fillpeaks.summary.html" /> 44 <output name="htmlOutput" file="faahKO-single.xset.merged.group.retcor.group.fillpeaks.summary.html" lines_diff="2"/>
45 </test> 45 </test>
46 </tests> 46 </tests>
47 47
48 <help><![CDATA[ 48 <help><![CDATA[
49 49
79 CAMERA.annotate ``*``.annotate.*.RData rdata.camera.``*`` 79 CAMERA.annotate ``*``.annotate.*.RData rdata.camera.``*``
80 ========================= =========================== ================================ 80 ========================= =========================== ================================
81 81
82 82
83 .. image:: xcms_summary_workflow.png 83 .. image:: xcms_summary_workflow.png
84
85 @HELP_XCMS_MANUAL@
84 86
85 --------------------------------------------------- 87 ---------------------------------------------------
86 88
87 Changelog/News 89 Changelog/News
88 -------------- 90 --------------