Mercurial > repos > lecorguille > xcms_summary

comparison xcms_summary.r @ 36:12c802da5367 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit e131bacd37bfaf2c4132fd214c81db9b8a9df513
author lecorguille
date Mon, 17 Sep 2018 08:47:17 -0400
parents 3d4339594010
children 1d2cc6c87acf
comparison
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35:79fe34cedc56 36:12c802da5367
13 cat("\tSESSION INFO\n") 13 cat("\tSESSION INFO\n")
14 14
15 #Import the different functions 15 #Import the different functions
16 source_local <- function(fname){ argv <- commandArgs(trailingOnly=FALSE); base_dir <- dirname(substring(argv[grep("--file=", argv)], 8)); source(paste(base_dir, fname, sep="/")) } 16 source_local <- function(fname){ argv <- commandArgs(trailingOnly=FALSE); base_dir <- dirname(substring(argv[grep("--file=", argv)], 8)); source(paste(base_dir, fname, sep="/")) }
17 source_local("lib.r") 17 source_local("lib.r")
18 source_local("lib-xcms3.x.x.r")
18 19
19 pkgs <- c("CAMERA","batch") 20 pkgs <- c("CAMERA","batch")
20 loadAndDisplayPackages(pkgs) 21 loadAndDisplayPackages(pkgs)
21 cat("\n\n"); 22 cat("\n\n");
22 23