Mercurial > repos > lecorguille > xcms_retcor

diff test-data/log.txt @ 1:f42bd3de6aad draft

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author lecorguille
date Fri, 08 Jan 2016 09:52:38 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/log.txt	Fri Jan 08 09:52:38 2016 -0500
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+	PACKAGE INFO
+parallel	3.1.2
+BiocGenerics	0.14.0
+Biobase	2.28.0
+Rcpp	0.12.0
+mzR	2.2.2
+xcms	1.44.0
+snow	0.3.13
+batch	1.1.4
+
+
+	ARGUMENTS INFO
+image	test-data/xset.group.RData
+xfunction	retcor
+xsetRdataOutput	test-data/xset.group.retcor.RData
+ticspdf	xset.group.retcor.TICs_corrected.pdf
+bicspdf	xset.group.retcor.BPCs_corrected.pdf
+rplotspdf	xset.group.retcor.Rplots.pdf
+method	obiwarp
+profStep	1
+zipfile	test-data/sacuri.zip
+
+
+	INFILE PROCESSING INFO
+
+
+	ARGUMENTS PROCESSING INFO
+
+
+	MAIN PROCESSING INFO
+center sample:  HU_neg_060 
+Processing: HU_neg_028  HU_neg_051  HU_neg_017  HU_neg_034  Blanc09  Blanc06  Blanc12  Blanc04  
+null device 
+          1 
+
+
+	XSET OBJECT INFO
+An "xcmsSet" object with 9 samples
+
+Time range: 0.7-1139.9 seconds (0-19 minutes)
+Mass range: 50.0019-999.9863 m/z
+Peaks: 135846 (about 15094 per sample)
+Peak Groups: 0 
+Sample classes: bio, blank 
+
+Profile settings: method = bin
+                  step = 0.01
+
+Memory usage: 13.8 MB
+
+
+	DONE