Mercurial > repos > lecorguille > xcms_retcor
diff xcms.r @ 17:3bd1e74d4abc draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit b3ba169290fd2e40dafe167f345106c1c3da3ebe
author | lecorguille |
---|---|
date | Wed, 08 Feb 2017 04:36:13 -0500 |
parents | 20a75ba4345b |
children | 8e740205c907 |
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--- a/xcms.r Sun Feb 05 08:57:02 2017 -0500 +++ b/xcms.r Wed Feb 08 04:36:13 2017 -0500 @@ -252,8 +252,7 @@ getBPCs(xcmsSet=xset,rt="corrected",pdfname=bicspdf) } -if (thefunction == "fillPeaks") { - cat("\t\tGET THE PEAK LIST\n") +if ((thefunction == "group" || thefunction == "fillPeaks") && exists("intval")) { getPeaklistW4M(xset,intval,convertRTMinute,numDigitsMZ,numDigitsRT,variableMetadataOutput,dataMatrixOutput) }