Mercurial > repos > lecorguille > xcms_plot_chromatogram
comparison xcms_plot_chromatogram.xml @ 17:9fff8c8ab4a3 draft
planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit eca29d4347fe2f4802091c4a06715232a6fd9253
| author | workflow4metabolomics |
|---|---|
| date | Mon, 15 Jul 2024 15:54:03 +0000 |
| parents | bf87ce10267e |
| children | 4631c19a75ff |
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| 16:bf87ce10267e | 17:9fff8c8ab4a3 |
|---|---|
| 1 <tool id="xcms_plot_chromatogram" name="xcms plot chromatogram" version="@TOOL_VERSION@+galaxy0"> | 1 <tool id="xcms_plot_chromatogram" name="xcms plot chromatogram" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> |
| 2 <description>Plots base peak intensity chromatogram (BPI) and total ion current chromatogram (TIC) from MSnbase or xcms experiment(s)</description> | 2 <description>Plots base peak intensity chromatogram (BPI) and total ion current chromatogram (TIC) from MSnbase or xcms experiment(s)</description> |
| 3 | 3 |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 <import>macros_xcms.xml</import> | 6 <import>macros_xcms.xml</import> |
| 95 | Sum of intensity (Y) of all ions detected at each retention time (X) | 95 | Sum of intensity (Y) of all ions detected at each retention time (X) |
| 96 | 96 |
| 97 **Base Peak Intensity Chromatogram (BPI)** | 97 **Base Peak Intensity Chromatogram (BPI)** |
| 98 | Sum of intensity (Y) of the most intense peaks at each retention time (X) | 98 | Sum of intensity (Y) of the most intense peaks at each retention time (X) |
| 99 | 99 |
| 100 @HELP_XCMS_MANUAL@ | |
| 101 | |
| 100 --------------------------------------------------- | 102 --------------------------------------------------- |
| 101 | 103 |
| 102 Changelog/News | 104 Changelog/News |
| 103 -------------- | 105 -------------- |
| 104 | 106 |