Mercurial > repos > lecorguille > xcms_merge

comparison xcms_merge.r @ 21:4dca783526d9 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a5136bfc124956893f4f0c91808d1c0d78c4ea01
author lecorguille
date Mon, 29 Apr 2019 06:10:06 -0400
parents 068243731881
children 2eb424218159
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20:068243731881 21:4dca783526d9
38 print(xset) 38 print(xset)
39 cat("\n\n") 39 cat("\n\n")
40 40
41 cat("\tSAVE RData\n") 41 cat("\tSAVE RData\n")
42 #saving R data in .Rdata file to save the variables used in the present tool 42 #saving R data in .Rdata file to save the variables used in the present tool
43 objects2save <- c("xdata", "zipfile", "singlefile", "md5sumList", "sampleNamesList", "chromTIC", "chromBPI") 43 objects2save <- c("xdata", "zipfile", "singlefile", "md5sumList", "sampleNamesList") #, "chromTIC", "chromBPI")
44 save(list=objects2save[objects2save %in% ls()], file="merged.RData") 44 save(list=objects2save[objects2save %in% ls()], file="merged.RData")