Mercurial > repos > lecorguille > xcms_merge

comparison xcms_merge.r @ 13:2d27c70635eb draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 317a00e08b72961bc7df134ebf4001fb783858a6
author lecorguille
date Fri, 06 Apr 2018 09:30:14 -0400
parents 9efcd7620cde
children 40791ab6c06b
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12:9efcd7620cde 13:2d27c70635eb
16 mergeXDataReturn <- mergeXData(args) 16 mergeXDataReturn <- mergeXData(args)
17 xdata <- mergeXDataReturn$xdata 17 xdata <- mergeXDataReturn$xdata
18 singlefile <- mergeXDataReturn$singlefile 18 singlefile <- mergeXDataReturn$singlefile
19 md5sumList <- mergeXDataReturn$md5sumList 19 md5sumList <- mergeXDataReturn$md5sumList
20 sampleNamesList <- mergeXDataReturn$sampleNamesList 20 sampleNamesList <- mergeXDataReturn$sampleNamesList
21 chromTIC <- mergeXDataReturn$chromTIC
22 chromBPI <- mergeXDataReturn$chromBPI
21 23
22 # Create a sampleMetada file 24 # Create a sampleMetada file
23 sampleNamesList <- getSampleMetadata(xdata=xdata, sampleMetadataOutput="sampleMetadata.tsv") 25 sampleNamesList <- getSampleMetadata(xdata=xdata, sampleMetadataOutput="sampleMetadata.tsv")
24 26
25 cat("\n\n") 27 cat("\n\n")