diff abims_xcms_group.xml @ 19:7f667b64d5a5 draft

planemo upload for repository https://github.com/workflow4metabolomics/xcms commit b274c5c21db1a6ad63c28d425a7a6bce483a4af4

--- a/abims_xcms_group.xml	Thu Feb 09 04:50:11 2017 -0500
+++ b/abims_xcms_group.xml	Fri Feb 10 11:01:55 2017 -0500
@@ -1,4 +1,4 @@
-<tool id="abims_xcms_group" name="xcms.group" version="2.1.1">
+<tool id="abims_xcms_group" name="xcms.group" version="2.1.0">
 
     <description>Group peaks together across samples using overlapping m/z bins and calculation of smoothed peak distributions in chromatographic time.</description>
 
@@ -12,10 +12,10 @@
     <command><![CDATA[
         @COMMAND_XCMS_SCRIPT@
         xfunction group
-        image $image
+        image '$image'
 
-        xsetRdataOutput $xsetRData
-        rplotspdf $rplotsPdf
+        xsetRdataOutput '$xsetRData'
+        rplotspdf '$rplotsPdf'
 
         method $methods.method sleep 0.001
         #if $methods.method == "density":
@@ -413,12 +413,10 @@
 Changelog/News
 --------------
 
-**Version 2.1.1 - 07/02/2017**
+**Version 2.1.0 - 07/02/2017**
 
 - IMPROVEMENT: Add an option to export the peak list at this step without have to wait camara.annotate
 
-**Version 2.1.0 - 03/02/2017**
-
 - IMPROVEMENT: xcms.group can deal with merged individual data from "xcms.xcmsSet Merger"
 
 **Version 2.0.6 - 06/07/2016**