view test-data/log.txt @ 7:031eec04312c draft

planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 1bf8810447bdd1268f67bfb64ead95ce82d8d85c
author lecorguille
date Fri, 08 Apr 2016 06:18:23 -0400
parents f00e39a4b0fb
children
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	PACKAGE INFO
parallel	3.2.2
BiocGenerics	0.16.1
Biobase	2.30.0
Rcpp	0.12.2
mzR	2.4.1
xcms	1.44.0
snow	0.4.1
batch	1.1.4


	ARGUMENTS INFO
xfunction	fillPeaks
image	/tmp/tmpk97EMC/files/000/dataset_1.dat
xsetRdataOutput	/tmp/tmpk97EMC/files/000/dataset_3.dat
method	chrom
zipfile	/tmp/tmpk97EMC/files/000/dataset_2.dat


	INFILE PROCESSING INFO


	ARGUMENTS PROCESSING INFO
files_root_directory	 sacuri 
Compute md5 checksum...


	MAIN PROCESSING INFO
sacuri/bio/HU_neg_017.mzXML 
sacuri/bio/HU_neg_028.mzXML 
sacuri/blank/Blanc04.mzXML 
sacuri/blank/Blanc06.mzXML 


null device 
          1 


	XSET OBJECT INFO
An "xcmsSet" object with 4 samples

Time range: 0.2-1140.1 seconds (0-19 minutes)
Mass range: 50.0021-999.9863 m/z
Peaks: 199718 (about 49930 per sample)
Peak Groups: 48958 
Sample classes: bio, blank 

Profile settings: method = bin
                  step = 0.01

Memory usage: 27.3 MB


	DONE