# HG changeset patch
# User lecorguille
# Date 1450865364 18000
# Node ID 4f4a1eec7d5466e6ceee2a87a4c7f2d25535128e
# Parent  7094739761096d041560497c37313c681477a4a6
remove biocondutor links

diff -r 709473976109 -r 4f4a1eec7d54 tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Aug 06 11:31:12 2015 -0400
+++ b/tool_dependencies.xml	Wed Dec 23 05:09:24 2015 -0500
@@ -1,33 +1,33 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="R" version="3.1.2">
-        <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="9f2fddb9d6e2" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="netcdf" version="4.3.3.1">
-        <repository changeset_revision="aae096c86ddb" name="package_netcdf_4_3_3_1" owner="lecorguille" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="36e1b1104eb2" name="package_netcdf_4_3_3_1" owner="lecorguille" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 
     <package name="xcms" version="1.44.0">
         <install version="1.0">
             <actions>
                 <action type="setup_r_environment">
-                    <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="9f2fddb9d6e2" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                         <package name="R" version="3.1.2" />
                     </repository>
-                    <repository changeset_revision="aae096c86ddb" name="package_netcdf_4_3_3_1" owner="lecorguille" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="36e1b1104eb2" name="package_netcdf_4_3_3_1" owner="lecorguille" toolshed="https://toolshed.g2.bx.psu.edu">
                         <package name="netcdf" version="4.3.3.1" />
                     </repository>
                    
                     
-                    <package>http://bioconductor.org/packages/3.1/bioc/src/contrib/BiocGenerics_0.14.0.tar.gz</package>
-                    <package>http://bioconductor.org/packages/3.1/bioc/src/contrib/Biobase_2.28.0.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/BiocGenerics_0.14.0.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/Biobase_2.28.0.tar.gz</package>
                     <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/Rcpp_0.12.0.tar.gz</package>
-                    <package>http://www.bioconductor.org/packages/3.1/bioc/src/contrib/ProtGenerics_1.0.0.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/ProtGenerics_1.0.0.tar.gz</package>
 
-                    <package>http://www.bioconductor.org/packages/3.1/bioc/src/contrib/zlibbioc_1.14.0.tar.gz</package>
-                    <package>http://www.bioconductor.org/packages/3.1/bioc/src/contrib/mzR_2.2.1.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/zlibbioc_1.14.0.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/mzR_2.2.2.tar.gz</package>
 
-                    <package>http://www.bioconductor.org/packages/3.1/bioc/src/contrib/xcms_1.44.0.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/xcms_1.44.0.tar.gz</package>
 
                     <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/snow_0.3-13.tar.gz</package>
                     <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_xcms_1_44_0/batch_1.1-4.tar.gz</package>