Mercurial > repos > lecorguille > package_r_pmcmr_4_1

diff tool_dependencies.xml @ 0:e0b0a43a0f81 draft default tip

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planemo upload
author lecorguille
date Mon, 25 Jan 2016 09:26:41 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Jan 25 09:26:41 2016 -0500
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+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.1.2">
+        <repository changeset_revision="1ca39eb16186" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+
+    <package name="pmcmr" version="4.1">
+        <install version="1.0">
+            <actions>
+                <action type="setup_r_environment">
+                    <repository changeset_revision="1ca39eb16186" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.1.2" />
+                    </repository>
+                   
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_pmcmr_4_1/PMCMR_4.1.tar.gz</package>
+                    <package>http://application.sb-roscoff.fr/download/w4m/cran-archive/package_r_pmcmr_4_1/batch_1.1-4.tar.gz</package>
+                </action>
+            </actions>
+        </install>
+        <readme>
+PMCMR: Calculate Pairwise Multiple Comparisons of Mean Rank Sums
+
+The Kruskal and Wallis one-way analysis of variance by ranks or van der Waerden's normal score test can be employed, if the data do not meet the assumptions for one-way ANOVA. Provided that significant differences were detected by the omnibus test, one may be interested in applying post-hoc tests for pairwise multiple comparisons (such as Nemenyi's test, Dunn's test, Conover's test, van der Waerden's test). Similarly, one-way ANOVA with repeated measures that is also referred to as ANOVA with unreplicated block design can also be conducted via the Friedman-Test or the Quade-test. The consequent post-hoc pairwise multiple comparison tests according to Nemenyi, Conover and Quade are also provided in this package. Finally Durbin's test for a two-way balanced incomplete block design (BIBD) is also given in this package.
+
+Author:     Thorsten Pohlert thorsten.pohlert at gmx.de
+
+        </readme>
+    </package>
+</tool_dependency>