Mercurial > repos > kpbioteam > minfi_rset
comparison minfi_rset.R @ 0:c3b42276697a draft
planemo upload for repository https://github.com/lh3/seqtk
| author | kpbioteam |
|---|---|
| date | Mon, 05 Feb 2018 06:56:59 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:c3b42276697a |
|---|---|
| 1 | |
| 2 require("minfi", quietly = TRUE) | |
| 3 | |
| 4 args <- commandArgs(trailingOnly = TRUE) | |
| 5 | |
| 6 input = args[1] | |
| 7 output = args[2] | |
| 8 | |
| 9 MSet <- get(load(input)) | |
| 10 | |
| 11 RSet <- ratioConvert(MSet, what = "both", keepCN = TRUE) | |
| 12 | |
| 13 save(RSet,file = output) | |
| 14 |