# HG changeset patch
# User kpbioteam
# Date 1527071812 14400
# Node ID 88f94d4c59c4d877816581b020e9cd6d59f55f87
# Parent  7bd0d3c7a8d377472a8ae3272f05378a1681a39c
planemo upload for repository https://github.com/kpbioteam/minfi_qc commit bb1622e57b83aa260687997e48fc4ec7011f8642

diff -r 7bd0d3c7a8d3 -r 88f94d4c59c4 README.md
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/README.md	Wed May 23 06:36:52 2018 -0400
@@ -0,0 +1,1 @@
+# Estimate sample-specific quality control (QC) for methylation data
diff -r 7bd0d3c7a8d3 -r 88f94d4c59c4 minfi_qc.xml
--- a/minfi_qc.xml	Tue Feb 06 05:40:33 2018 -0500
+++ b/minfi_qc.xml	Wed May 23 06:36:52 2018 -0400
@@ -7,11 +7,11 @@
         Rscript  ${__tool_directory__}/minfi_qc.R  "$input1" "$output1" "$output2"
     ]]></command>
     <inputs>
-        <param type="data" name="input1" format="rdata" />
+        <param type="data" name="input1" format="rdata" label="Methylation Data"/>
     </inputs>
     <outputs>
-        <data name="output1" format="txt" />
-        <data name="output2" format="png" />
+        <data name="output1" format="txt" label="Quality Control Report"/>
+        <data name="output2" format="png" lable="Quality Control Plot"/>
     </outputs>
     <tests>
         <test>
@@ -26,4 +26,4 @@
     <citations>
         <citation type="doi">10.1093/bioinformatics/btu049</citation>
     </citations>
-</tool>
\ No newline at end of file
+</tool>
diff -r 7bd0d3c7a8d3 -r 88f94d4c59c4 test.Rmd
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test.Rmd	Wed May 23 06:36:52 2018 -0400
@@ -0,0 +1,6 @@
+---
+title: "An example Knitr/R Markdown document"
+author: "Kpbioteam"
+date: "23 Feb 2018"
+output: html_document
+---