comparison minfi_getbeta.xml @ 4:cd6144e8c8ca draft default tip

planemo upload commit 0590dcbf1cff7e99b97e2c33e1bfe2a4d9b447aa-dirty

3:4953a5a6c006

            <param name="input1" value="RSet.rdata"/>
            <output name="output1" file="getbeta.bedgraph"/>
        </test>
    </tests>
    <help><![CDATA[
        Tool return Beta value report the methylation levels
    ]]></help>
    <citations>
        <citation type="doi">10.1093/bioinformatics/btu049</citation>
    </citations>
</tool>

4:cd6144e8c8ca

            <param name="input1" value="RSet.rdata"/>
            <output name="output1" file="getbeta.bedgraph"/>
        </test>
    </tests>
    <help><![CDATA[
        This  tools outputs a matrix of methylation indices (beta values), which are continuous values between 0 and 1 representing the ratio/fraction of the intensity of the methylated-probe signal to the total signal intensity for each probed CpG site.
    ]]></help>
    <citations>
        <citation type="doi">10.1093/bioinformatics/btu049</citation>
    </citations>
</tool>