# HG changeset patch
# User kpbioteam
# Date 1529231672 14400
# Node ID 30a95c57b9ea635a8898004118b26b0c6ed35a9c
# Parent  6a075dd8f382e65006a170941aff3b3fe4e9b5b2
planemo upload for repository https://github.com/kpbioteam/minfi_dmr commit ae8bbf92f39ac4b7130852a9220f0ccbd91b1530

diff -r 6a075dd8f382 -r 30a95c57b9ea minfi_dmr.xml
--- a/minfi_dmr.xml	Sun Jun 17 05:55:58 2018 -0400
+++ b/minfi_dmr.xml	Sun Jun 17 06:34:32 2018 -0400
@@ -25,7 +25,7 @@
                     </param>
  </inputs>
     <outputs>
-        <data name="output1" format="GTF" label="Differentially Methylated Regions" /> 
+        <data name="output1" format="bedgraph" label="Differentially Methylated Regions" /> 
    </outputs>
     <tests>
         <test>
@@ -38,7 +38,7 @@
             <param name="input7" value="0.02"/>
             <param name="input8" value="permutation"/>
             <param name="input9" value="FALSE"/>
-            <output name="output1" file="dmr.gtf"/>
+            <output name="output1" file="dmr.bedgraph"/>
         </test>
     </tests>
     <help><![CDATA[
diff -r 6a075dd8f382 -r 30a95c57b9ea test-data/dmr.bedgraph
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/dmr.bedgraph	Sun Jun 17 06:34:32 2018 -0400
@@ -0,0 +1,16720 @@
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+chrX	15872521	15872521	1	*	0.5	0.5
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diff -r 6a075dd8f382 -r 30a95c57b9ea test-data/dmr.gtf
--- a/test-data/dmr.gtf	Sun Jun 17 05:55:58 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,16720 +0,0 @@
-seqnames	start	end	width	strand	area	value
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