Mercurial > repos > kevyin > meme_chip

comparison tool_dependencies.xml @ 14:0dbbcbf05ffd draft

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Uploaded
author kevyin
date Mon, 12 Nov 2012 18:43:05 -0500
parents 4bd96f3f1f48
children eb07216abda6
comparison
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13:4bd96f3f1f48 14:0dbbcbf05ffd
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="meme" version="4.9.0"> 3 <package name="meme" version="4.9.0">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action> 6 <action type="download_by_url">ftp://ftp.ebi.edu.au/pub/software/MEME/r4.9.0/rc5/meme_4.9.0.tar.gz</action>
7 <action type="shell_command">configure --prefix=$INSTALL_DIR</action>
7 <action type="shell_command">make</action> 8 <action type="shell_command">make</action>
8 <action type="move_file"> 9 <action type="shell_command">make install</action>
9 <source>bwa</source>
10 <destination>$INSTALL_DIR/bin</destination>
11 </action>
12 <action type="set_environment"> 10 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
14 </action> 12 </action>
15 </actions> 13 </actions>
16 </install> 14 </install>