# HG changeset patch # User jorrit # Date 1361936973 18000 # Node ID 06e8a43d7d65448ea4cdb847da0c68f754f11600 # Parent f48064da784905d176430a46a847e5c149fc1f99 Uploaded diff -r f48064da7849 -r 06e8a43d7d65 ontologizer.xml --- a/ontologizer.xml Tue Feb 26 22:46:52 2013 -0500 +++ b/ontologizer.xml Tue Feb 26 22:49:33 2013 -0500 @@ -1,7 +1,7 @@ from http://compbio.charite.de/contao/ - ontologizer-jar + ontologizer-jar java -Xmx2G -jar $ONTOLOGIZER_JAR --go $go --association $gaf --population $population --studyset $studyset --dot 0.05 --mtc "$mtc" --calculation "$calc"; mv table-*.txt $tablefile; mv view-*.dot $dotfile diff -r f48064da7849 -r 06e8a43d7d65 tool_dependencies.xml --- a/tool_dependencies.xml Tue Feb 26 22:46:52 2013 -0500 +++ b/tool_dependencies.xml Tue Feb 26 22:49:33 2013 -0500 @@ -1,6 +1,6 @@ - + http://compbio.charite.de/contao/index.php/cmdlineOntologizer.html?file=tl_files/ontologizer/cmdline/Ontologizer.jar