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added subversion as dependency
author jorrit <jhpoelen@xs4all.nl>
date Mon, 25 Mar 2013 17:59:16 -0700
parents 315ecba2921d
children b456591c9f6f
comparison
equal deleted inserted replaced
45:bb20766df19c 46:532808477800
10 10
11 # GO:TermFinder needs dependencies GraphViz and GD graphics libraries 11 # GO:TermFinder needs dependencies GraphViz and GD graphics libraries
12 sudo apt-get $APT_OPTS install libgraphviz-perl 12 sudo apt-get $APT_OPTS install libgraphviz-perl
13 sudo apt-get $APT_OPTS install libgd-gd2-perl 13 sudo apt-get $APT_OPTS install libgd-gd2-perl
14 14
15 # subversion for retrieving versioned gene ontologies
16 sudo apt-get $APT_OPTS install subversion
15 17
16 --- Term Enrichment related --- 18 --- Term Enrichment related ---
17 (currently used - heavily tied to mysql / old data model) 19 (currently used - heavily tied to mysql / old data model)
18 http://geneontology.svn.sourceforge.net/viewvc/geneontology/go-dev/trunk/amigo/amigo/cgi-bin/term_enrichment?view=log 20 http://geneontology.svn.sourceforge.net/viewvc/geneontology/go-dev/trunk/amigo/amigo/cgi-bin/term_enrichment?view=log
19 21