Mercurial > repos > joachim-jacob > blat

view tool_dependencies.xml @ 2:df0c23b49a81 draft default tip

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Readme updated
author Joachim Jacob <joachim.jacob@gmail.com>
date Wed, 24 Jul 2013 16:35:36 +0200
parents 3cec538aab33
children
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<?xml version="1.0"?>
<tool_dependency>
    <package name="blat" version="1.0.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url">http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/blat/blat</action>
                <action type="move_file">
                    <source>blat</source>
                    <destination>$INSTALL_DIR/bin</destination>
                </action>
                <action type="shell_command">chmod +x $INSTALL_DIR/bin/blat</action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
The BLAT binary for linux x86_64 is retrieved from UCSC.
        </readme>
    </package>
</tool_dependency>