Mercurial > repos > jmchilton > ngscbltest
comparison tool_dependencies.xml @ 6:6dcdf58e2515 draft default tip
Uploaded
| author | jmchilton |
|---|---|
| date | Mon, 26 Aug 2013 18:48:24 -0400 |
| parents | 775c869b5ecd |
| children |
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| 5:775c869b5ecd | 6:6dcdf58e2515 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <!-- | 3 |
| 4 <package name="tophat2" version="2.0.8b"> | 4 <package name="tophat2" version="2.0.8b"> |
| 5 <install version="1.0"> | 5 <install version="1.0"> |
| 6 <actions> | 6 <actions> |
| 7 <action type="cloudbiolinux_install" cbl_revision="master" tool_name="tophat2" tool_version="2.0.8b" /> | 7 <action type="cloudbiolinux_install" cbl_revision="master" tool_name="tophat2" tool_version="2.0.8b" /> |
| 8 </actions> | 8 </actions> |
| 9 </install> | 9 </install> |
| 10 <readme> | 10 <readme> |
| 11 Tophat2. | 11 Tophat2. |
| 12 </readme> | 12 </readme> |
| 13 </package> | 13 </package> |
| 14 --> | |
| 15 <package name="tophat" version="1.3.3"> | 14 <package name="tophat" version="1.3.3"> |
| 16 <install version="1.0"> | 15 <install version="1.0"> |
| 17 <actions> | 16 <actions> |
| 18 <action type="cloudbiolinux_install" cbl_url="https://github.com/jmchilton/cloudbiolinux/archive/master.zip" /> <!-- Grab package name and version from package statement. --> | 17 <action type="cloudbiolinux_install" cbl_url="https://github.com/jmchilton/cloudbiolinux/archive/master.zip" /> <!-- Grab package name and version from package statement. --> |
| 19 </actions> | 18 </actions> |
| 20 </install> | 19 </install> |
| 21 <readme>TopHat 1.3.3. | 20 <readme>TopHat 1.3.3. |
| 22 </readme> | 21 </readme> |
| 23 </package> | 22 </package> |
| 24 <!-- | |
| 25 <package name="cufflinks2" version="2.1.1"> | 23 <package name="cufflinks2" version="2.1.1"> |
| 26 <install version="1.0"> | 24 <install version="1.0"> |
| 27 <actions> | 25 <actions> |
| 28 <action type="cloudbiolinux_install" tool_name="cufflinks" tool_version="2.1.1" /> | 26 <action type="cloudbiolinux_install" tool_name="cufflinks" tool_version="2.1.1" /> |
| 29 </actions> | 27 </actions> |
| 30 </install> | 28 </install> |
| 31 <readme> | 29 <readme> |
| 32 Cufflinks2. | 30 Cufflinks2. |
| 33 </readme> | 31 </readme> |
| 34 </package> | 32 </package> |
| 35 --> | |
| 36 </tool_dependency> | 33 </tool_dependency> |