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0
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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6
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3
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0
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4 <package name="tophat2" version="2.0.8b">
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5 <install version="1.0">
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6 <actions>
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3
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7 <action type="cloudbiolinux_install" cbl_revision="master" tool_name="tophat2" tool_version="2.0.8b" />
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0
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8 </actions>
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9 </install>
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10 <readme>
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3
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11 Tophat2.
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0
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12 </readme>
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13 </package>
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1
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14 <package name="tophat" version="1.3.3">
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15 <install version="1.0">
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16 <actions>
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5
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17 <action type="cloudbiolinux_install" cbl_url="https://github.com/jmchilton/cloudbiolinux/archive/master.zip" /> <!-- Grab package name and version from package statement. -->
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1
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18 </actions>
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19 </install>
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20 <readme>TopHat 1.3.3.
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21 </readme>
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22 </package>
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0
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23 <package name="cufflinks2" version="2.1.1">
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24 <install version="1.0">
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25 <actions>
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4
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26 <action type="cloudbiolinux_install" tool_name="cufflinks" tool_version="2.1.1" />
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0
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27 </actions>
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28 </install>
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29 <readme>
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30 Cufflinks2.
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31 </readme>
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32 </package>
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33 </tool_dependency> |
