Mercurial > repos > jjohnson > trinityrnaseq
annotate tool_dependencies.xml @ 3:a9d882069cd4
Fix grep for determining successful run.
author | Jim Johnson <jj@umn.edu> |
---|---|
date | Fri, 08 Nov 2013 16:11:37 -0600 |
parents | 5eb99d21ef0d |
children | a67c0a0d24ac |
rev | line source |
---|---|
0 | 1 <?xml version="1.0"?> |
2 <tool_dependency> | |
1
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
3 <package name="trinityrnaseq" version="2013_08_14"> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
4 <repository changeset_revision="df23c0ef83a6" name="package_trinityrnaseq_2013_08_14" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" /> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
5 </package> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
6 <package name="samtools" version="0.1.18"> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
7 <repository changeset_revision="5f7ec5048224" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" /> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
8 </package> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
9 <package name="bowtie" version="1.0.0"> |
a34ce2b18877
Update tool_dependencies to trinityrnaseq_2013_08_14 and add samtools and bowtie
Jim Johnson <jj@umn.edu>
parents:
0
diff
changeset
|
10 <repository changeset_revision="e682af6a72cd" name="package_bowtie_1_0_0" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" /> |
0 | 11 </package> |
2
5eb99d21ef0d
Add trinityrnaseq_norm and transcriptsToOrfs tools
Jim Johnson <jj@umn.edu>
parents:
1
diff
changeset
|
12 <package name="hmmer" version="3.0"> |
5eb99d21ef0d
Add trinityrnaseq_norm and transcriptsToOrfs tools
Jim Johnson <jj@umn.edu>
parents:
1
diff
changeset
|
13 <repository changeset_revision="3bc37773c609" name="package_hmmer_3_0" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" /> |
5eb99d21ef0d
Add trinityrnaseq_norm and transcriptsToOrfs tools
Jim Johnson <jj@umn.edu>
parents:
1
diff
changeset
|
14 </package> |
0 | 15 </tool_dependency> |
16 |