Mercurial > repos > jjohnson > translate_bed_sequences

diff test-data/translated_bed_sequences.fa @ 0:57e586ee821e

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author jjohnson
date Wed, 08 Jan 2014 18:33:29 -0500
parents
children aa93f7910259
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/translated_bed_sequences.fa	Wed Jan 08 18:33:29 2014 -0500
@@ -0,0 +1,26 @@
+>JUNC00019210_2 pep:novel chromosome:GRCh37:15:40902460:40907575:1 depth:1
+SYENSEKVRNGRNKKLEDNYCEIT
+>JUNC00019210_3 pep:novel chromosome:GRCh37:15:40902461:40907552:1 depth:1
+HMKIVRKSEMEGIRN*
+>JUNC00000003_1 pep:novel chromosome:GRCh37:9:17406:18053:-1 depth:1
+APWTSGPCRYKKYVFLDPLAGAVTKTHVMLGAE
+>JUNC00000003_2 pep:novel chromosome:GRCh37:9:17435:18052:-1 depth:1
+PPGRAGPAGTRSMSSWTPWLVL*
+>JUNC00000003_3 pep:novel chromosome:GRCh37:9:17404:18051:-1 depth:1
+PLDERALQVQEVCLPGPPGWCCNKDPCDAGGRD
+>JUNC00000874_2 pep:novel chromosome:GRCh37:8:27369376:27370079:1 depth:1
+PTSCNPSDMSHGYVTVKGYHKAKATHRGPWLVA
+>JUNC00001897_1 pep:novel chromosome:GRCh37:7:99077597:99079392:1 depth:1
+HLLSLFFQLGVHICIPNFRNNSVSHCTQLRVLL
+>JUNC00001897_2 pep:novel chromosome:GRCh37:7:99077598:99079363:1 depth:1
+IYCLYFSNLVCISVYPTSEITV*
+>JUNC00002152_1 pep:novel chromosome:GRCh37:7:148909514:148910831:1 depth:1
+DQQDLADRDIPTDPNSGENKSLSSQHMTFCHGS
+>JUNC00002152_2 pep:novel chromosome:GRCh37:7:148909515:148910814:1 depth:1
+ISRIWQTEIFPRIPIQVRTRVSHLST*
+>JUNC00002625_1 pep:novel chromosome:GRCh37:6:41766614:41767580:-1 depth:1
+LKDSGGLAVIIERRLGSMSSLT
+>JUNC00002625_3 pep:novel chromosome:GRCh37:6:41766612:41767578:-1 depth:1
+KRFRWSGRNHREKIGVHVVFDQ
+>JUNC00002772_1 pep:novel chromosome:GRCh37:6:84856494:84862316:-1 depth:1
+LKMKSEAVMNQFENSMRRYL*