comparison translate_bed_sequences.xml @ 1:639ee511d552

Add biopython requirement

0:57e586ee821e

<?xml version="1.0"?>
<tool id="translate_bed_sequences" name="Translate BED Sequences" version="0.0.1">
  <description>3 frame translation of BED augmented with a sequence column</description>
  <command interpreter="python">translate_bed_sequences.py  --input "$input" 
  #if $reference:
   --reference $reference
  #else:
   --reference ${input.metadata.dbkey}

1:639ee511d552

<?xml version="1.0"?>
<tool id="translate_bed_sequences" name="Translate BED Sequences" version="0.0.1">
  <description>3 frame translation of BED augmented with a sequence column</description>
  <requirements>
    <requirement type="package" version="1.62">biopython</requirement>
    <requirement type="python-module">Bio</requirement>
  </requirements>
  <command interpreter="python">translate_bed_sequences.py  --input "$input" 
  #if $reference:
   --reference $reference
  #else:
   --reference ${input.metadata.dbkey}