# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1415634326 21600
# Node ID c56e27adfbff6b1cc8ab1de23760d022a5566452
# Parent  76892da053f2917514e216534f81130f3b78b55e
Add a build field in the tool-data to allow for filtering on genome build

diff -r 76892da053f2 -r c56e27adfbff snpSift_dbnsfp.xml
--- a/snpSift_dbnsfp.xml	Thu Oct 23 05:58:20 2014 -0500
+++ b/snpSift_dbnsfp.xml	Mon Nov 10 09:45:26 2014 -0600
@@ -31,7 +31,7 @@
                 <param name="dbnsfp" type="select" label="Genome">
                     <options from_data_table="snpsift_dbnsfp">
                         <column name="name" index="1"/>
-                        <column name="value" index="2"/>
+                        <column name="value" index="3"/>
                     </options>
                 </param>
                 <param name="annotations" type="select" multiple="true" display="checkboxes" label="Annotate with">
diff -r 76892da053f2 -r c56e27adfbff tool-data/snpsift_dbnsfp.loc.sample
--- a/tool-data/snpsift_dbnsfp.loc.sample	Thu Oct 23 05:58:20 2014 -0500
+++ b/tool-data/snpsift_dbnsfp.loc.sample	Mon Nov 10 09:45:26 2014 -0600
@@ -1,2 +1,3 @@
-#id	desc	path	annotations
-#GRCh37_dbNSFP2.1	GRCh37 dbNSFP2.1	/depot/snpeff/	SIFT_pred,Uniprot_acc
+#id	build	description	path	annotations
+#GRCh37_dbNSFP2.4	GRCh37	GRCh37 dbNSFP2.4	/depot/snpeff/	SIFT_pred,Uniprot_acc
+#GRCh38_dbNSFP2.7	GRCh38	GRCh38 dbNSFP2.7	/depot/snpeff/	SIFT_pred,Uniprot_acc
diff -r 76892da053f2 -r c56e27adfbff tool_data_table_conf.xml.sample
--- a/tool_data_table_conf.xml.sample	Thu Oct 23 05:58:20 2014 -0500
+++ b/tool_data_table_conf.xml.sample	Mon Nov 10 09:45:26 2014 -0600
@@ -1,6 +1,6 @@
 <tables>
     <table name="snpsift_dbnsfp" comment_char="#">
-        <columns>dbkey, name, value, annotations</columns>
+        <columns>dbkey, build, name, value, annotations</columns>
         <file path="tool-data/snpsift_dbnsfp.loc" />
     </table>
 </tables>