Mercurial > repos > jjohnson > snpeff_with_dep

changeset 10:9cd24981dbd2

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tool_dependencies.xml - add unzip shell_command
author Jim Johnson <jj@umn.edu>
date Tue, 18 Sep 2012 08:36:28 -0500
parents 38b3a6b97bd1
children e9e4ff80e72b
files tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Sep 14 14:48:54 2012 -0500
+++ b/tool_dependencies.xml	Tue Sep 18 08:36:28 2012 -0500
@@ -7,6 +7,7 @@
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://sourceforge.net/projects/snpeff/files/snpEff_latest_core.zip</action>
+                <action type="shell_command">unzip snpEff_latest_core.zip</action>
                 <action type="move_file">
                     <source>snpEff_3_0/SnpSift.jar</source>
                     <destination>$INSTALL_DIR/bin</destination>