Mercurial > repos > jjohnson > snpeff_with_dep

diff snpSift_int.xml @ 20:1cae7fb31da7

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SnpEffv3.1
author Jim Johnson <jj@umn.edu>
date Mon, 26 Nov 2012 15:54:26 -0600
parents aab5e0adb26d
children 50c1a8ff6c82
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line diff
--- a/snpSift_int.xml	Fri Sep 21 18:52:07 2012 -0500
+++ b/snpSift_int.xml	Mon Nov 26 15:54:26 2012 -0600
@@ -5,7 +5,7 @@
 		You can change the amount of memory used, just change the -Xmx parameter (e.g. use -Xmx2G for 2Gb of memory)
 	-->
 	<requirements>
-		<requirement type="package" version="1.7">SnpSift</requirement>
+                <requirement type="package" version="3.1">snpEff</requirement>
 	</requirements>
 	<command>
 		cat $input | java -Xmx2G -jar \$JAVA_JAR_PATH/SnpSift.jar int $bedFile > $output