Mercurial > repos > jjohnson > snpeff_with_dep

comparison snpSift_int.xml @ 5:c641d515de2e

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Add stdio tags
author Jim Johnson <jj@umn.edu>
date Fri, 14 Sep 2012 13:12:02 -0500
parents ebe280eca4a4
children e9e4ff80e72b
comparison
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4:ceaa79a5ee16 5:c641d515de2e
16 <param format="bed" name="bedFile" type="data" label="Intervals (BED file)"/> 16 <param format="bed" name="bedFile" type="data" label="Intervals (BED file)"/>
17 </inputs> 17 </inputs>
18 <outputs> 18 <outputs>
19 <data format="vcf" name="output" /> 19 <data format="vcf" name="output" />
20 </outputs> 20 </outputs>
21 21 <stdio>
22 <exit_code range=":-1" level="fatal" description="Error: Cannot open file" />
23 <exit_code range="1:" level="fatal" description="Error" />
24 </stdio>
22 <help> 25 <help>
23 26
24 You can filter using intervals (BED file) 27 You can filter using intervals (BED file)
25 28
26 For details about this tool, please go to http://snpeff.sourceforge.net/SnpSift.html#intervals 29 For details about this tool, please go to http://snpeff.sourceforge.net/SnpSift.html#intervals