Mercurial > repos > jjohnson > snpeff_with_dep

comparison snpSift_annotate.xml @ 5:c641d515de2e

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Add stdio tags
author Jim Johnson <jj@umn.edu>
date Fri, 14 Sep 2012 13:12:02 -0500
parents ebe280eca4a4
children e9e4ff80e72b
comparison
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4:ceaa79a5ee16 5:c641d515de2e
12 <inputs> 12 <inputs>
13 <param format="vcf" name="input" type="data" label="VCF input"/> 13 <param format="vcf" name="input" type="data" label="VCF input"/>
14 <param format="vcf" name="dbSnp" type="data" label="VCF File with ID field annotated (e.g. dnSNP.vcf)" help="The ID field for a variant in input will be assigned from a matching variant in this file."/> 14 <param format="vcf" name="dbSnp" type="data" label="VCF File with ID field annotated (e.g. dnSNP.vcf)" help="The ID field for a variant in input will be assigned from a matching variant in this file."/>
15 </inputs> 15 </inputs>
16 <stdio> 16 <stdio>
17 <exit_code range="-1" level="fatal" description="Error: Cannot open file" /> 17 <exit_code range=":-1" level="fatal" description="Error: Cannot open file" />
18 <exit_code range="1:" level="fatal" description="Error" />
18 </stdio> 19 </stdio>
19 20
20 <outputs> 21 <outputs>
21 <data format="vcf" name="output" /> 22 <data format="vcf" name="output" />
22 </outputs> 23 </outputs>