Mercurial > repos > jjohnson > snpeff_with_dep

comparison tool_dependencies.xml @ 7:3cb1d19d57d1

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Remove download at end of url
author Jim Johnson <jj@umn.edu>
date Fri, 14 Sep 2012 14:07:09 -0500
parents e6b662b96061
children 1562bb333568
comparison
equal deleted inserted replaced
6:e6b662b96061 7:3cb1d19d57d1
4 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/bin</environment_variable> 4 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/bin</environment_variable>
5 </set_environment> 5 </set_environment>
6 <package name="snpEff" version="3.0f"> 6 <package name="snpEff" version="3.0f">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions> 8 <actions>
9 <action type="download_by_url">http://sourceforge.net/projects/snpeff/files/snpEff_latest_core.zip/download</action> 9 <action type="download_by_url">http://sourceforge.net/projects/snpeff/files/snpEff_latest_core.zip</action>
10 <action type="shell_command">pwd</action> 10 <action type="shell_command">pwd</action>
11 <action type="shell_command">ls</action> 11 <action type="shell_command">ls</action>
12 <action type="move_file"> 12 <action type="move_file">
13 <source>SnpSift.jar</source> 13 <source>SnpSift.jar</source>
14 <destination>$INSTALL_DIR/bin</destination> 14 <destination>$INSTALL_DIR/bin</destination>