Mercurial > repos > jjohnson > snpeff_to_peptides

annotate test-data/peptides_10_10.fa @ 0:41a666a3d8a5 draft default tip

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author jjohnson
date Tue, 17 Dec 2013 18:45:13 -0500
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jjohnson
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1 >ENSP00000363782 pep:sap chromosome:GRCh37:1:22778472:22853855:1 gene:ENSG00000184677 transcript:ENST00000374651 gene_biotype:protein_coding transcript_biotype:protein_coding snp_location:chr1:22846709 codon_change:Gtg/Atg sap:V885M
41a666a3d8a5 Uploaded
jjohnson
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2 FSAPSMLERHMVTHVGGKPFS
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jjohnson
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3 >ENSP00000346634 pep:sap chromosome:GRCh37:1:36690017:36770958:1 gene:ENSG00000054118 transcript:ENST00000354618 gene_biotype:protein_coding transcript_biotype:protein_coding snp_location:chr1:36752433 codon_change:gCc/gTc sap:A201V
41a666a3d8a5 Uploaded
jjohnson
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4 QAAGDNQGDEVKEQTFSGGTS
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jjohnson
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5 >ENSP00000318415 pep:sap chromosome:GRCh37:1:89445139:89458455:-1 gene:ENSG00000213516 transcript:ENST00000321792 gene_biotype:protein_coding transcript_biotype:protein_coding snp_location:chr1:89449390 codon_change:atA/atG sap:I40M
41a666a3d8a5 Uploaded
jjohnson
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6 KYGRIVEVLLMKDRETNKSRG
41a666a3d8a5 Uploaded
jjohnson
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7 >ENSP00000446099 pep:sap chromosome:GRCh37:1:89445142:89458643:-1 gene:ENSG00000213516 transcript:ENST00000399794 gene_biotype:protein_coding transcript_biotype:protein_coding snp_location:chr1:89449390 codon_change:atA/atG sap:I40M
41a666a3d8a5 Uploaded
jjohnson
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8 KYGRIVEVLLMKDRETNKSRG
41a666a3d8a5 Uploaded
jjohnson
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9 >ENSP00000318415 pep:sap chromosome:GRCh37:1:89445139:89458455:-1 gene:ENSG00000213516 transcript:ENST00000321792 gene_biotype:protein_coding transcript_biotype:protein_coding snp_location:chr1:89449434 codon_change:Aca/Gca sap:T26A
41a666a3d8a5 Uploaded
jjohnson
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10 NTETNEKALEAVFGKYGRIVE
41a666a3d8a5 Uploaded
jjohnson
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11 >ENSP00000446099 pep:sap chromosome:GRCh37:1:89445142:89458643:-1 gene:ENSG00000213516 transcript:ENST00000399794 gene_biotype:protein_coding transcript_biotype:protein_coding snp_location:chr1:89449434 codon_change:Aca/Gca sap:T26A
41a666a3d8a5 Uploaded
jjohnson
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12 NTETNEKALEAVFGKYGRIVE