view data_manager_conf.xml @ 0:e1d9f6a0ad53

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<?xml version="1.0"?>
<data_managers>
  <data_manager tool_file="data_manager/data_manager_snpEff_databases.xml" id="data_manager_snpeff_databases" >
    <data_table name="snpeff_databases">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" output_ref="out_file" >  <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" -->
        </column>
      </output>
    </data_table>
  </data_manager>
  <data_manager tool_file="data_manager/data_manager_snpEff_download.xml" id="data_manager_snpeff_download" >
    <data_table name="snpeff_genomedb">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" output_ref="out_file" >  <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" -->
        </column>
      </output>
    </data_table>
    <data_table name="snpeff_regulationdb">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" output_ref="out_file" >  <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" -->
        </column>
      </output>
    </data_table>
  </data_manager>
</data_managers>