annotate tool_data_table_conf.xml.sample @ 6:eb394dd65c98

Add mutli-select to data managers from Bjoern, filter unique database options in snpEff_download.xml snpEff.xml
author Jim Johnson <jj@umn.edu>
date Thu, 28 Nov 2013 08:16:11 -0600
parents 8952990fcab9
children 4be8e0068bc3
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
1 <tables>
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
2 <table name="snpeff_databases" comment_char="#">
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
3 <columns>value, name</columns>
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
4 <file path="tool-data/snpeff_databases.loc" />
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
5 </table>
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
6 <table name="snpeff_genomedb" comment_char="#">
5
8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
Jim Johnson <jj@umn.edu>
parents: 0
diff changeset
7 <columns>value, name, path</columns>
0
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
8 <file path="tool-data/snpeff_genomedb.loc" />
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
9 </table>
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
10 <table name="snpeff_regulationdb" comment_char="#">
5
8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
Jim Johnson <jj@umn.edu>
parents: 0
diff changeset
11 <columns>genome, value, name</columns>
0
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
12 <file path="tool-data/snpeff_regulationdb.loc" />
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
13 </table>
5
8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
Jim Johnson <jj@umn.edu>
parents: 0
diff changeset
14 <table name="snpeff_annotations" comment_char="#">
8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
Jim Johnson <jj@umn.edu>
parents: 0
diff changeset
15 <columns>genome, value, name</columns>
8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
Jim Johnson <jj@umn.edu>
parents: 0
diff changeset
16 <file path="tool-data/snpeff_annotations.loc" />
8952990fcab9 Update to snpEff version 3.4 and add data managers to download snpEff genome reference databases
Jim Johnson <jj@umn.edu>
parents: 0
diff changeset
17 </table>
0
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
18 </tables>
e1d9f6a0ad53 Uploaded
jjohnson
parents:
diff changeset
19