Mercurial > repos > jjohnson > shear

view README @ 5:aaaa5a071ff0

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Update to SHEAR v 0.2.3
author Jim Johnson <jj@umn.edu>
date Thu, 17 Oct 2013 08:01:38 -0500
parents ea76da1e7281
children
line wrap: on
line source

SHEAR: Sample Heterogeneity Estimation and Assembly by Reference

SHEAR is an assembly tool that accounts for heterogeneous variants by estimating their representative percentages and allowing for selective assembly of sample subpopulations. By utilizing structural variant detection algorithms, SHEAR also offers improved performance in the form of a stronger ability to handle difficult structural variant types and improved computational efficiency.

Source code is available upon request (please contact landman@cs.umn.edu).

SHEAR will be made publicly available upon publication.

http://vk.cs.umn.edu/SHEAR/