view tool_data_table_conf.xml.sample @ 7:8180f6b0249b

Upgrade to SHEAR version 0.2.4
author Jim Johnson <jj@umn.edu>
date Tue, 22 Oct 2013 08:20:52 -0500
parents ea76da1e7281
children
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<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
<tables>
    <!-- Locations of all fasta files under genome directory -->
    <table name="all_fasta" comment_char="#">
        <columns>value, dbkey, name, path</columns>
        <file path="tool-data/all_fasta.loc" />
    </table>
    <!-- Locations of indexes in the BWA mapper format -->
    <table name="bwa_indexes" comment_char="#">
        <columns>value, dbkey, name, path</columns>
        <file path="tool-data/bwa_index.loc" />
    </table>
    <!-- Locations of genome reference in the UCSC twobit format -->
    <table name="twobit" comment_char="#">
        <columns>value, path</columns>
        <file path="tool-data/twobit.loc" />
    </table>
</tables>