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view tool_dependencies.xml @ 10:2620f7984418

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Update to shear version 0.2.5
author Jim Johnson <jj@umn.edu>
date Fri, 08 Nov 2013 09:21:17 -0600
parents 8180f6b0249b
children 13d4d1d1da6a
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<?xml version="1.0"?>
<tool_dependency>
    <package name="samtools" version="0.1.18">
        <repository changeset_revision="5f7ec5048224" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="bwa" version="0.6.2">
        <repository changeset_revision="8be5fbfc1548" name="package_bwa_0_6_2" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="blat_server" version="latest">
        <repository changeset_revision="455a4bd49c52" name="package_blat_server" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="cap3" version="3">
        <repository changeset_revision="a472ccd208e2" name="package_cap3_3" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="crest" version="1.0.1">
        <repository changeset_revision="89a9d6ce7f96" name="package_crest_1_0_1" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
          <readme>
CREST requires: 
  Bioperl package Bio::DB:Sam  
          </readme>
    </package>
    <package name="shear" version="0.2.5">
        <repository changeset_revision="8c3f8debdb51" name="package_shear_0_2_5" owner="jjohnson" toolshed="http://testtoolshed.g2.bx.psu.edu" />
    </package>

</tool_dependency>