view test-data/matches.txt @ 0:08439b004404

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author jjohnson
date Mon, 13 Jan 2014 14:57:53 -0500
parents
children b0276d1141fe
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p(c|s): 0.999973; p(!c|s): 0.000027; adapter: solexa-reverse
SOLEXA2_0414:3:1:12658:1069#0/1
AGATCGGAAGAGCGGT
|||||||||||| |||
AGATCGGAAGAGNGGT
_______Q__BBBBBB
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
SOLEXA2_0414:3:1:3923:1105#0/1
AGATCGGAAGAGCGGTTCAG
||||||||||||||||||||
AGATCGGAAGAGCGGTTCAG
b____YWWYYVVTVVYYYYY
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
SOLEXA2_0414:3:1:9865:1095#0/1
AGATCGGAAGAGCGGTTCAGC
|||||||||||||||||||||
AGATCGGAAGAGCGGTTCAGC
______[[[[Y__________
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-forward
SOLEXA2_0414:3:1:11267:1102#0/1
AGATCGGAAGAGCG
||||||||||||||
AGATCGGAAGAGCG
BBBBBBBBBBBBBB
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 0.999999; p(!c|s): 0.000001; adapter: solexa-forward
SOLEXA2_0414:3:1:13556:1104#0/1
AGATCGGAAGAG
||||||||||||
AGATCGGAAGAG
BBBBBBBBBBBB
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 0.999995; p(!c|s): 0.000005; adapter: solexa-forward
SOLEXA2_0414:3:1:13625:1097#0/1
AGATCGGAAGA
|||||||||||
AGATCGGAAGA
Y____BBBBBB
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
SOLEXA2_0414:3:1:10939:1119#0/1
AGATCGGAAGAGCGGTTCAGCAGGAATGC
||||||| |||||||||||||||||| ||
AGATCGGGAGAGCGGTTCAGCAGGAAGGC
BBBBBBBBBBBBBBBBBBBBBBBBBBBBB
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]

p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
SOLEXA2_0414:3:1:12110:1126#0/1
AGATCGGAAGAGCGGTTCAGCAGGAATGCCG
|||||||||||||||||||||||||||||||
AGATCGGAAGAGCGGTTCAGCAGGAATGCCG
____Y______YYYYYQWWWW___S_BBBBB
[1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]