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comparison test-data/matches.txt @ 0:08439b004404

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Uploaded
author jjohnson
date Mon, 13 Jan 2014 14:57:53 -0500
parents
children b0276d1141fe
comparison
equal deleted inserted replaced
-1:000000000000 0:08439b004404
1 p(c|s): 0.999973; p(!c|s): 0.000027; adapter: solexa-reverse
2 SOLEXA2_0414:3:1:12658:1069#0/1
3 AGATCGGAAGAGCGGT
4 |||||||||||| |||
5 AGATCGGAAGAGNGGT
6 _______Q__BBBBBB
7 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
8
9 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
10 SOLEXA2_0414:3:1:3923:1105#0/1
11 AGATCGGAAGAGCGGTTCAG
12 ||||||||||||||||||||
13 AGATCGGAAGAGCGGTTCAG
14 b____YWWYYVVTVVYYYYY
15 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
16
17 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
18 SOLEXA2_0414:3:1:9865:1095#0/1
19 AGATCGGAAGAGCGGTTCAGC
20 |||||||||||||||||||||
21 AGATCGGAAGAGCGGTTCAGC
22 ______[[[[Y__________
23 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
24
25 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-forward
26 SOLEXA2_0414:3:1:11267:1102#0/1
27 AGATCGGAAGAGCG
28 ||||||||||||||
29 AGATCGGAAGAGCG
30 BBBBBBBBBBBBBB
31 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
32
33 p(c|s): 0.999999; p(!c|s): 0.000001; adapter: solexa-forward
34 SOLEXA2_0414:3:1:13556:1104#0/1
35 AGATCGGAAGAG
36 ||||||||||||
37 AGATCGGAAGAG
38 BBBBBBBBBBBB
39 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
40
41 p(c|s): 0.999995; p(!c|s): 0.000005; adapter: solexa-forward
42 SOLEXA2_0414:3:1:13625:1097#0/1
43 AGATCGGAAGA
44 |||||||||||
45 AGATCGGAAGA
46 Y____BBBBBB
47 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
48
49 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
50 SOLEXA2_0414:3:1:10939:1119#0/1
51 AGATCGGAAGAGCGGTTCAGCAGGAATGC
52 ||||||| |||||||||||||||||| ||
53 AGATCGGGAGAGCGGTTCAGCAGGAAGGC
54 BBBBBBBBBBBBBBBBBBBBBBBBBBBBB
55 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
56
57 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
58 SOLEXA2_0414:3:1:12110:1126#0/1
59 AGATCGGAAGAGCGGTTCAGCAGGAATGCCG
60 |||||||||||||||||||||||||||||||
61 AGATCGGAAGAGCGGTTCAGCAGGAATGCCG
62 ____Y______YYYYYQWWWW___S_BBBBB
63 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
64