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annotate test-data/matches.txt @ 0:08439b004404

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Uploaded
author jjohnson
date Mon, 13 Jan 2014 14:57:53 -0500
parents
children b0276d1141fe
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0
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1 p(c|s): 0.999973; p(!c|s): 0.000027; adapter: solexa-reverse
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2 SOLEXA2_0414:3:1:12658:1069#0/1
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3 AGATCGGAAGAGCGGT
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4 |||||||||||| |||
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5 AGATCGGAAGAGNGGT
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6 _______Q__BBBBBB
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7 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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8
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9 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
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10 SOLEXA2_0414:3:1:3923:1105#0/1
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11 AGATCGGAAGAGCGGTTCAG
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12 ||||||||||||||||||||
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13 AGATCGGAAGAGCGGTTCAG
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14 b____YWWYYVVTVVYYYYY
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15 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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16
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17 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
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18 SOLEXA2_0414:3:1:9865:1095#0/1
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19 AGATCGGAAGAGCGGTTCAGC
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20 |||||||||||||||||||||
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21 AGATCGGAAGAGCGGTTCAGC
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22 ______[[[[Y__________
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23 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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24
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25 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-forward
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26 SOLEXA2_0414:3:1:11267:1102#0/1
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27 AGATCGGAAGAGCG
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28 ||||||||||||||
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29 AGATCGGAAGAGCG
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30 BBBBBBBBBBBBBB
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31 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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32
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33 p(c|s): 0.999999; p(!c|s): 0.000001; adapter: solexa-forward
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34 SOLEXA2_0414:3:1:13556:1104#0/1
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35 AGATCGGAAGAG
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36 ||||||||||||
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37 AGATCGGAAGAG
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38 BBBBBBBBBBBB
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39 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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40
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41 p(c|s): 0.999995; p(!c|s): 0.000005; adapter: solexa-forward
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42 SOLEXA2_0414:3:1:13625:1097#0/1
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43 AGATCGGAAGA
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44 |||||||||||
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45 AGATCGGAAGA
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46 Y____BBBBBB
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47 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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48
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49 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
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50 SOLEXA2_0414:3:1:10939:1119#0/1
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51 AGATCGGAAGAGCGGTTCAGCAGGAATGC
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52 ||||||| |||||||||||||||||| ||
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53 AGATCGGGAGAGCGGTTCAGCAGGAAGGC
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54 BBBBBBBBBBBBBBBBBBBBBBBBBBBBB
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55 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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56
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57 p(c|s): 1.000000; p(!c|s): 0.000000; adapter: solexa-reverse
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58 SOLEXA2_0414:3:1:12110:1126#0/1
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59 AGATCGGAAGAGCGGTTCAGCAGGAATGCCG
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60 |||||||||||||||||||||||||||||||
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61 AGATCGGAAGAGCGGTTCAGCAGGAATGCCG
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62 ____Y______YYYYYQWWWW___S_BBBBB
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63 [1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00, 1.00]
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