Mercurial > repos > jjohnson > package_bioc_seqlogo_1_24_0

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Imported from capsule None
author jjohnson
date Tue, 14 Oct 2014 10:06:44 -0400
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<?xml version="1.0"?>
<tool_dependency>
  <package name="R" version="2.15.0">
      <repository changeset_revision="3a70cdc41d21" name="package_r_2_15_0" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="bioc_seqlogo" version="1.24.0">
      <install version="1.0">
          <actions>
              <action type="download_file">http://bioconductor.org/packages/2.11/bioc/src/contrib/seqLogo_1.24.0.tar.gz</action>
                <action type="set_environment_for_install">
                  <repository changeset_revision="3a70cdc41d21" name="package_r_2_15_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
                      <package name="R" version="2.15.0" />
                    </repository>
                </action>
                <action type="shell_command">Rscript -e "install.packages(c('seqLogo_1.24.0.tar.gz'),lib='$INSTALL_DIR', repos=NULL, dependencies=FALSE)"</action>
                <action type="set_environment">
                  <environment_variable action="prepend_to" name="R_LIBS_USER">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        </readme>
    </package>
</tool_dependency>