Mercurial > repos > jjohnson > mzsqlite_psm_align
comparison mzsqlite_psm_align.xml @ 3:ce4174c80be5 draft
planemo upload for repository https://github.com/jj-umn/galaxytools/tree/master/mzsqlite_psm_align commit 3a37749e711a57ed1ca14b7d23a7ce14f630e6fe-dirty
| author | jjohnson |
|---|---|
| date | Tue, 10 Apr 2018 10:48:42 -0400 |
| parents | 46113c737b68 |
| children | a96b2754171c |
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| 2:46113c737b68 | 3:ce4174c80be5 |
|---|---|
| 17 --gffutils_file '$gffutilsdb' | 17 --gffutils_file '$gffutilsdb' |
| 18 #end if | 18 #end if |
| 19 #if $readlignments: | 19 #if $readlignments: |
| 20 --reads_bam '$readlignments' | 20 --reads_bam '$readlignments' |
| 21 #end if | 21 #end if |
| 22 #if 'probed' in $output_formats: | 22 #if 'probed' in str($output_formats).split(','): |
| 23 --probed '$probed' | 23 --probed '$probed' |
| 24 #end if | 24 #end if |
| 25 #if 'prosam' in $output_formats: | 25 #if 'prosam' in str($output_formats).split(','): |
| 26 --prosam '$prosam' | 26 --prosam '$prosam' |
| 27 #end if | 27 #end if |
| 28 #if 'probam' in $output_formats: | 28 #if 'probam' in str($output_formats).split(','): |
| 29 --probam '$probam' | 29 --probam '$probam' |
| 30 #end if | 30 #end if |
| 31 #if $genomicref: | 31 #if $genomicref: |
| 32 --genomeReference $genomicref | 32 --genomeReference $genomicref |
| 33 #else | 33 #else |