Mercurial > repos > jjohnson > mothur_toolsuite
diff mothur/tool-data/mothur_taxonomy.loc.sample @ 3:6b358d0f17b4 draft
Update to Mothur version 1.24
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Wed, 05 Sep 2012 19:49:43 -0500 |
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| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/mothur/tool-data/mothur_taxonomy.loc.sample Wed Sep 05 19:49:43 2012 -0500 @@ -0,0 +1,24 @@ +#This is a sample file distributed with Galaxy that enables tools +#to use a directory of metagenomics files. +#file has this format (white space characters are TAB characters): +# +# Silva reference files: http://www.mothur.org/wiki/Silva_reference_files +# +#<taxonomyname> <file_base> +# +#archaea.gg /project/db/galaxy/mothur/Silva.archaea/silva.archaea.gg.tax +#archaea.silva /project/db/galaxy/mothur/Silva.archaea/silva.archaea.silva.tax +#archaea.rdp /project/db/galaxy/mothur/Silva.archaea/silva.archaea.rdp.tax +#archaea.ncbi /project/db/galaxy/mothur/Silva.archaea/silva.archaea.ncbi.tax +#bacteria.gg /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.gg.tax +#bacteria.silva /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.silva.tax +#bacteria.ncbi /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.ncbi.tax +#bacteria.rdp /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp.tax +#bacteria.rdp6 /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp6.tax +#eukarya.silva /project/db/galaxy/mothur/silva.eukarya.silva.tax +#eukarya.ncbi /project/db/galaxy/mothur/silva.eukarya.ncbi.tax +#trainset6_032010.rdp.tax /project/db/galaxy/mothur/RDP/trainset6_032010.rdp.tax +#trainset7_112011.pds.tax /project/db/galaxy/mothur/RDP/trainset7_112011.pds.tax +#trainset7_112011.rdp.tax /project/db/galaxy/mothur/RDP/trainset7_112011.rdp.tax +#FungiLSU_train_1400bp_8506_mod.tax /project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.tax +#