Mercurial > repos > jjohnson > mothur_toolsuite
annotate mothur/suite_config.xml @ 14:216bf44bf185 draft default tip
Update README with suggested tool_panael layout
author | Jim Johnson <jj@umn.edu> |
---|---|
date | Tue, 04 Dec 2012 09:56:39 -0600 |
parents | e076d95dbdb5 |
children |
rev | line source |
---|---|
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
1 <suite id="Mothur_toolsuite" name="Mothur Metagenomics" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
2 <description>Mothur metagenomics commands as Galaxy tools</description> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
3 <tool id="mothur_align_check" name="Align.check" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
4 <description>Calculate the number of potentially misaligned bases</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
5 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
6 <tool id="mothur_align_seqs" name="Align.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
7 <description>Align sequences to a template alignment</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
8 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
9 <tool id="mothur_amova" name="Amova" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
10 <description>Analysis of molecular variance</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
11 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
12 <tool id="mothur_anosim" name="Anosim" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
13 <description>Non-parametric multivariate analysis of changes in community structure</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
14 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
15 <tool id="mothur_bin_seqs" name="Bin.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
16 <description>Order Sequences by OTU</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
17 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
18 <tool id="mothur_chimera_bellerophon" name="Chimera.bellerophon" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
19 <description>Find putative chimeras using bellerophon</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
20 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
21 <tool id="mothur_chimera_ccode" name="Chimera.ccode" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
22 <description>Find putative chimeras using ccode</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
23 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
24 <tool id="mothur_chimera_check" name="Chimera.check" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
25 <description>Find putative chimeras using chimeraCheck</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
26 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
27 <tool id="mothur_chimera_pintail" name="Chimera.pintail" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
28 <description>Find putative chimeras using pintail</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
29 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
30 <tool id="mothur_chimera_slayer" name="Chimera.slayer" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
31 <description>Find putative chimeras using slayer</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
32 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
33 <tool id="mothur_chop_seqs" name="Chop.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
34 <description>Trim sequences to a specified length</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
35 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
36 <tool id="mothur_classify_otu" name="Classify.otu" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
37 <description>Assign sequences to taxonomy</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
38 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
39 <tool id="mothur_classify_seqs" name="Classify.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
40 <description>Assign sequences to taxonomy</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
41 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
42 <tool id="mothur_clearcut" name="Clearcut" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
43 <description>Generate a tree using relaxed neighbor joining</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
44 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
45 <tool id="mothur_cluster_classic" name="Cluster.classic" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
46 <description>Assign sequences to OTUs (Dotur implementation)</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
47 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
48 <tool id="mothur_cluster_fragments" name="Cluster.fragments" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
49 <description> Group sequences that are part of a larger sequence</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
50 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
51 <tool id="mothur_cluster_split" name="Cluster.split" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
52 <description>Assign sequences to OTUs (Operational Taxonomic Unit) splits large matrices</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
53 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
54 <tool id="mothur_cluster" name="Cluster" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
55 <description>Assign sequences to OTUs (Operational Taxonomic Unit)</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
56 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
57 <tool id="mothur_collect_shared" name="Collect.shared" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
58 <description>Generate collector's curves for calculators on OTUs</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
59 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
60 <tool id="mothur_collect_single" name="Collect.single" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
61 <description>Generate collector's curves for OTUs</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
62 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
63 <tool id="mothur_consensus_seqs" name="Consensus.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
64 <description>Find a consensus sequence for each OTU or phylotype</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
65 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
66 <tool id="mothur_corr_axes" name="Corr.axes" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
67 <description>correlation of data to axes</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
68 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
69 <tool id="mothur_degap_seqs" name="Degap.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
70 <description>Remove gap characters from sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
71 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
72 <tool id="mothur_deunique_seqs" name="Deunique.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
73 <description>Return all sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
74 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
75 <tool id="mothur_dist_seqs" name="Dist.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
76 <description>calculate uncorrected pairwise distances between aligned sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
77 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
78 <tool id="mothur_dist_shared" name="Dist.shared" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
79 <description>Generate a phylip-formatted dissimilarity distance matrix among multiple groups</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
80 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
81 <tool id="mothur_fastq_info" name="Fastq.info" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
82 <description>Convert fastq to fasta and quality</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
83 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
84 <tool id="mothur_filter_seqs" name="Filter.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
85 <description>removes columns from alignments</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
86 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
87 <tool id="mothur_get_groups" name="Get.groups" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
88 <description>Select groups</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
89 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
90 <tool id="mothur_get_group" name="Get.group" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
91 <description>group names from shared or from list and group</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
92 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
93 <tool id="mothur_get_lineage" name="Get.lineage" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
94 <description>Picks by taxon</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
95 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
96 <tool id="mothur_get_otulist" name="Get.otulist" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
97 <description>Get otus for each distance in a otu list</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
98 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
99 <tool id="mothur_get_oturep" name="Get.oturep" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
100 <description>Generate a fasta with a representative sequence for each OTU</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
101 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
102 <tool id="mothur_get_otus" name="Get.otus" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
103 <description>Get otus containing sequences from specified groups</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
104 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
105 <tool id="mothur_get_rabund" name="Get.rabund" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
106 <description>Get rabund from a otu list or sabund</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
107 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
108 <tool id="mothur_get_relabund" name="Get.relabund" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
109 <description>Calculate the relative abundance of each otu</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
110 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
111 <tool id="mothur_get_sabund" name="Get.sabund" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
112 <description>Get sabund from a otu list or rabund</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
113 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
114 <tool id="mothur_get_seqs" name="Get.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
115 <description>Picks sequences by name</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
116 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
117 <tool id="mothur_get_sharedseqs" name="Get.sharedseqs" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
118 <description>Get shared sequences at each distance from list and group</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
119 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
120 <tool id="mothur_hcluster" name="Hcluster" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
121 <description>Assign sequences to OTUs (Operational Taxonomic Unit)</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
122 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
123 <tool id="mothur_heatmap_bin" name="Heatmap.bin" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
124 <description>Generate a heatmap for OTUs</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
125 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
126 <tool id="mothur_heatmap_sim" name="Heatmap.sim" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
127 <description>Generate a heatmap for pariwise similarity</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
128 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
129 <tool id="mothur_homova" name="Homova" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
130 <description>Homogeneity of molecular variance</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
131 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
132 <tool id="mothur_indicator" name="Indicator" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
133 <description>Identify indicator "species" for nodes on a tree</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
134 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
135 <tool id="mothur_libshuff" name="Libshuff" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
136 <description>Cramer-von Mises tests communities for the same structure</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
137 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
138 <tool id="mothur_list_seqs" name="List.seqs" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
139 <description>Lists the names (accnos) of the sequences</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
140 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
141 <tool id="mothur_make_design" name="Make Design" version="1.19.0" > |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
142 <description>Assign groups to Sets</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
143 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
144 <tool id="mothur_make_fastq" name="Make.fastq" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
145 <description>Convert fasta and quality to fastq</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
146 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
147 <tool id="mothur_make_files" name="Make.group" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
148 <description>Make a group file</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
149 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
150 <tool id="mothur_make_shared" name="Make.shared" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
151 <description>Make a shared file from a list and a group</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
152 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
153 <tool id="mothur_mantel" name="Mantel" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
154 <description>Mantel correlation coefficient between two matrices.</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
155 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
156 <tool id="mothur_merge_files" name="Merge.files" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
157 <description>Merge data</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
158 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
159 <tool id="mothur_merge_groups" name="Merge.groups" version="1.19.0" > |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
160 <description>Merge groups in a shared file</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
161 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
162 <tool id="mothur_metastats" name="Metastats" version="1.19.0" > |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
163 <description>generate principle components plot data</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
164 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
165 <tool id="mothur_nmds" name="Nmds" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
166 <description>generate non-metric multidimensional scaling data</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
167 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
168 <tool id="mothur_normalize_shared" name="Normalize.shared" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
169 <description>Normalize the number of sequences per group to a specified level</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
170 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
171 <tool id="mothur_otu_hierarchy" name="Otu.hierarchy" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
172 <description>Relate OTUs at different distances</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
173 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
174 <tool id="mothur_pairwise_seqs" name="Pairwise.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
175 <description>calculate uncorrected pairwise distances between sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
176 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
177 <tool id="mothur_parse_list" name="Parse.list" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
178 <description>Generate a List file for each group</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
179 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
180 <tool id="mothur_parsimony" name="Parsimony" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
181 <description>Describes whether two or more communities have the same structure</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
182 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
183 <tool id="mothur_pca" name="Pca" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
184 <description>Principal Coordinate Analysis for a shared file</description> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
185 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
186 <tool id="mothur_pcoa" name="Pcoa" version="1.19.0" > |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
187 <description>Principal Coordinate Analysis for a distance matrix</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
188 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
189 <tool id="mothur_phylo_diversity" name="Phylo.diversity" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
190 <description>Alpha Diversity calculates unique branch length</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
191 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
192 <tool id="mothur_phylotype" name="Phylotype" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
193 <description>Assign sequences to OTUs based on taxonomy</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
194 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
195 <tool id="mothur_pre_cluster" name="Pre.cluster" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
196 <description>Remove sequences due to pyrosequencing errors</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
197 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
198 <tool id="mothur_rarefaction_shared" name="Rarefaction.shared" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
199 <description>Generate inter-sample rarefaction curves for OTUs</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
200 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
201 <tool id="mothur_rarefaction_single" name="Rarefaction.single" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
202 <description>Generate intra-sample rarefaction curves for OTUs</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
203 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
204 <tool id="mothur_remove_groups" name="Remove.groups" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
205 <description>Remove groups from groups,fasta,names,list,taxonomy</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
206 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
207 <tool id="mothur_remove_lineage" name="Remove.lineage" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
208 <description>Picks by taxon</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
209 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
210 <tool id="mothur_remove_otus" name="Remove.otus" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
211 <description>Remove otus containing sequences from specified groups</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
212 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
213 <tool id="mothur_remove_rare" name="Remove.rare" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
214 <description>Remove rare OTUs</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
215 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
216 <tool id="mothur_remove_seqs" name="Remove.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
217 <description>Remove sequences by name</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
218 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
219 <tool id="mothur_reverse_seqs" name="Reverse.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
220 <description>Reverse complement the sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
221 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
222 <tool id="mothur_screen_seqs" name="Screen.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
223 <description>Screen sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
224 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
225 <tool id="mothur_sens_spec" name="Sens.spec" version="1.19.0" > |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
226 <description>Determine the quality of OTU assignment</description> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
227 </tool> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
228 <tool id="mothur_sffinfo" name="Sffinfo" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
229 <description>Summarize the quality of sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
230 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
231 <tool id="mothur_split_abund" name="Split.abund" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
232 <description>Separate sequences into rare and abundant groups</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
233 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
234 <tool id="mothur_split_groups" name="Split.groups" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
235 <description>Generates a fasta file for each group</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
236 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
237 <tool id="mothur_sub_sample" name="Sub.sample" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
238 <description>Create a sub sample</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
239 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
240 <tool id="mothur_summary_seqs" name="Summary.seqs" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
241 <description>Summarize the quality of sequences</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
242 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
243 <tool id="mothur_summary_shared" name="Summary.shared" version="1.19.0"> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
244 <description>Summary of calculator values for OTUs</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
245 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
246 <tool id="mothur_summary_single" name="Summary.single" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
247 <description>Summary of calculator values for OTUs</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
248 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
249 <tool id="mothur_tree_shared" name="Tree.shared" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
250 <description>Generate a newick tree for dissimilarity among groups</description> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
251 </tool> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
252 <tool id="tree_vector" name="TreeVector" version="1.0"> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
253 <description>Draw a Phylogenic Tree</description> |
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
254 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
255 <tool id="mothur_trim_seqs" name="Trim.seqs" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
256 <description>Trim sequences - primers, barcodes, quality</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
257 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
258 <tool id="mothur_unifrac_unweighted" name="unifrac.unweighted" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
259 <description>Describes whether two or more communities have the same structure</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
260 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
261 <tool id="mothur_unifrac_weighted" name="unifrac.weighted" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
262 <description>Describes whether two or more communities have the same structure</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
263 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
264 <tool id="mothur_unique_seqs" name="Unique.seqs" version="1.19.0"> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
265 <description>Return unique sequences</description> |
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
266 </tool> |
2
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
267 <tool id="mothur_venn" name="Venn" version="1.19.0"> |
e076d95dbdb5
Migrated tool version 1.19.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
1
diff
changeset
|
268 <description>Generate Venn diagrams for groups </description> |
1
c7923b34dea4
Migrated tool version 1.16.0 from old tool shed archive to new tool shed repository
jjohnson
parents:
0
diff
changeset
|
269 </tool> |
0
591e72edabed
Migrated tool version 1.15.1 from old tool shed archive to new tool shed repository
jjohnson
parents:
diff
changeset
|
270 </suite> |